Publications:

A unified lexicon of predictive DNA sequence motifs from ENCODE transcription factor binding and chromatin accessibility assays

Chang M. Yun*, Salil Deshpande*, Vivekanandan Ramalingam*, Vivian Hecht*, Aman Patel*, Anusri Pampari*, Selin Jessa, Ryan Zhao, Austin Wang, Anshul Kundaje^.
Zenodo, August 2026.

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The Encyclopedia of DNA Elements

The ENCODE Project Consortium*, Timothy E. Reddy*.
bioRxiv, July 2026.

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Decoding common and rare noncoding variant effects across cellular and developmental contexts

Andrew R. Marderstein*, Soumya Kundu*, Evin M. Padhi, Salil Deshpande, Austin Wang, Esther Robb, Ying Sun, Chang M. Yun, Diego Pomales-Matos, Yilin Xie, Serena H. Chang, Iris M. Chin, Aayushi J. Shah, Zachary A. Gardell, M. Ryan Corces, Daniel Nachun, Selin Jessa, Anshul Kundaje^ & Stephen B. Montgomery^.
Nature Genetics, June 2026.

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JASPAR 2026: expansion of transcription factor binding profiles and integration of deep learning models

Damla Ovek Baydar*, Ieva Rauluseviciute*, Dina R Aronsen, Romain Blanc-Mathieu, Ine Bonthuis, Herman de Beukelaer, Katalin Ferenc, Alice Jegou, Vipin Kumar, Roza Berhanu Lemma, Jérémy Lucas, Mathis Pochon, Chang M. Yun, Vivekanandan Ramalingam, Salil Sanjay Deshpande, Aman Patel, Georgi K Marinov, Austin T Wang, Alejandro Aguirre, Jaime A Castro-Mondragon, Damir Baranasic, Jeanne Chèneby, Sveinung Gundersen, Morten Johansen, Aziz Khan, Marieke L Kuijjer, Eivind Hovig, Boris Lenhard^, Albin Sandelin^, Klaas Vandepoele^, Wyeth W Wasserman^, François Parcy^, Anshul Kundaje^, Anthony Mathelier^.
Nucleic Acids Research, January 2026.

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Robust Electroreduction of CO2 at a Poly(4-vinylpyridine)–Copper Electrode

Sathish Ponnurangam*, Chang Min Yun, Irina V. Chernyshova^.
ChemElectroChem, October 2015.

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